Report for 5340.m00339

 > 5340.m00339, length: 388, copies: 1 

MTYWVSSGICSFIFTVLIALLGMQVIIHRRSIKRQRLIRQRDEYFQQHGGQLLSDMMKIDCNLEFTLYRQEDIEV

ATNDFDKNQIIGEGGQGTVYKGFIESIPVAIKRCKGMDESRRMEFGQELLILCRVNHDHVVKLLGCCLLFEVPIL

VYEFVPNKTLHDLLHGQDGRCYISLATRLRIAAESSQALGHLHSLARPILHGDVKSANILLGDNLIAKVADFGCS

IIARMDEEALVAKGTVGYLDPEYLQSCKLTDKSDVYSFGVVLVELLTGKKPRCLVSVFQDAMKEGTVDELIDKEI

IKEDDLEVIHQVAELTSRCLAMPGDKRPTMSQVAQELRRLTGLVRQRLDAAGELIALREVDRSFTRTIDSTSYTR

SRTTEYFTLGITS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	80	276	4.2e-36
Ser/Thr pkinase [Pfam ls]	80	333	6.7e-34

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	51	356	3e-27
FLS2 [A.thaliana]	54	342	6e-28
Pto [L. esculentum]	60	337	2e-41
Rpg1 [Hordeum vulgare]	77	368	1e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out

Report for 5340.m00339

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)