Report for 5350.m00118

> 5350.m00118, length: 243, copies: 1
MAPAILNLSSSSSFSPQHAIVLLVHLIILLSCHAVKQSAARSVNYSEMDRQALLSFKASTSSDPVGVLHSWSTSS
LDFCNWSGVRCGDIPGLLGTGSKSLRVVNLAFNSLAGGIPHSLASSSSLTVLNLTNNLFFGTIPASLFNGSSNLA
IIDLRMNAFSGPIPNFYKMSALQILNLAQNNLSGSIPPSLGKVSSINLISLEMNNLEGSIPETLSNIKNLSMLSL
GYNMLTRYVPAIVEIIST

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]991228.1
LRR [Pfam ls]1231470.072
LRR [Pfam ls]1711940.26

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]991220.4
LRR [sensitive, ls]991228.1
LRR [sensitive, ls]1231470.0035
LRR [sensitive, ls]1231470.072
LRR [sensitive, ls]1481702.7
LRR [sensitive, ls]14817054
LRR [sensitive, ls]1711940.013
LRR [sensitive, ls]1711940.26
LRR [sensitive, ls]1952182.7
LRR [sensitive, ls]19521854
LRR [sensitive, ls]2192426
LRR [sensitive, ls]219242120

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
CLV2 [A. thaliana]422363e-13
Xa21 [O. sativa]442387e-12
FLS2 [A.thaliana]472384e-23
CLV2 [A. thaliana]492281e-11
Xa21 [O. sativa]492351e-22
FLS2 [A.thaliana]622355e-16
FLS2 [A.thaliana]762134e-15
Cf-9 [L. pimpinellifolium]872311e-12
CLV2 [A. thaliana]872314e-16
CLV2 [A. thaliana]872367e-16
CLV2 [A. thaliana]872353e-14
CLV2 [A. thaliana]872364e-14
FLS2 [A.thaliana]872352e-19
FLS2 [A.thaliana]872352e-17
FLS2 [A.thaliana]872356e-17
FLS2 [A.thaliana]872424e-15
FLS2 [A.thaliana]872385e-13
FLS2 [A.thaliana]872377e-13
FLS2 [A.thaliana]872439e-13
FLS2 [A.thaliana]872421e-10
Xa21 [O. sativa]872383e-13
Xa21 [O. sativa]872364e-12
Xa21 [O. sativa]872269e-12
Xa21 [O. sativa]872354e-11
Xa21 [O. sativa]952426e-13
Cf-9 [L. pimpinellifolium]972358e-14
Xa21 [O. sativa]982355e-13
CLV2 [A. thaliana]992353e-15
Cf-9 [L. pimpinellifolium]1002382e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation