Report for 5350.m00125

 > 5350.m00125, length: 210, copies: 1 

MPAGRGRRLAALRLRRAALAWEKRGEMSGGAGVSHPPLLIFLSCNTITPSSAQPSNRSETDLQALLCFKQSITND

PTGAFSSWNISLHFCRWNGVTCGRTSPAHVVSINLTSMKLSGVLPACMGNLTSLQTLVLDRNNLEGTIPESLARS

LSLIELNLSRNFLSGQIPASLFNGSSKLVIHEYLHGNTIWAGYRIPNMYRISYLYLGFVS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	128	148	1.9
LRR [Pfam ls]	152	176	0.049

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	104	127	3.7
LRR [sensitive, ls]	104	127	75
LRR [sensitive, ls]	128	148	0.093
LRR [sensitive, ls]	128	148	1.9
LRR [sensitive, ls]	152	176	0.0024
LRR [sensitive, ls]	152	176	0.049

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	33	189	3e-20
FLS2 [A.thaliana]	59	172	3e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5350.m00125

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)