Report for 5363.m00169

 > 5363.m00169, length: 357, copies: 1 

CSVWHGKLLNVNKNDGIYINADNVLHLRLAATDFQDLSKNKRKTNVELVVGASIVSFVLALIMILLMIRGNKFKC

CGAPFHDNEGRGGIIAFRYTDLAHATKNFSEKLGAGGFGSVFKGVLTNMATIAVKKLDGAHQGEKQFRAESHAAV

LNWITMHQIAIGVARGLSYLHESCRECIIHCDIKPENILLDISYFPKLADFGMATFVGRDFSRVLTTFRGTVGYL

APEWISGVAITPKVDVYSFGMVLFEIISGRRNSPEVHTSGNYDATYFPVRAINKLHEGDMSSLVDPRLHGDYNLD

EVVRVCKVACWCIQDDEFDRPTMREVVRVLEGLQELDMPPMPRLLATLTNFSAVASM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	102	145	0.00017
Ser/Thr pkinase [Pfam ls]	102	332	6.8e-22
Ser/Thr pkinase [Pfam fs]	159	327	2.4e-31

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	35	334	3e-18
Pto [L. esculentum]	92	331	1e-24
Rpg1 [Hordeum vulgare]	139	349	2e-17
Rpg1 [Hordeum vulgare]	151	347	8e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	46	68	in -> out

Report for 5363.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)