Report for 5487.m00189

 > 5487.m00189, length: 425, copies: 1 

MAYGKPHEKLGTKYCKKFLEARAFKFSSYLLVIILTEERTQIERVTFRCITRGEEELLAKEYLFEEAFEGYEILL

GCLITVVIVGVVSISCHLRRRAHNLKRSKKDIEVTAVSVEYEEVTCKQMCTKEIYDATENLSPLNVIGQGIAGKV

YKGVLANGWPVAVKHIVKNEHAETFLREVTSLSHVRHPNLVSLRGYCDGQEECFLVYELCINGNLSEWLFGKDKN

LSWIQRLQIALGSACGLWFLHIYPEGCIVHRDVKPTNILLGVDMEPKLSDFGLSRVIDIGVSHVSSEVRGTFGYV

DPEYRHNHKVNAAGDVYSFGMVLLQLLSGKRAINIMNTAKPMSLDRMASMLIREGNVLEFADPRLNGEYSTEAFD

LSLKLALSCTGHKKQRPSMEQVVSHLEKALKISMRDDDKHNSISIIESHS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	136	329	4.2e-33
Ser/Thr pkinase [Pfam ls]	136	403	2.2e-27

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	73	403	2e-30
Pto [L. esculentum]	127	407	7e-44
Rpg1 [Hordeum vulgare]	133	401	3e-29
Rpg1 [Hordeum vulgare]	133	403	7e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	71	93	out -> in

Report for 5487.m00189

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)