Report for 5492.m00171

 > 5492.m00171, length: 378, copies: 1 

GSSCKAGGDSHRALTYWTVRFNLVPYQYLEGTLEDGEEIAVKRLSTTSSQGFHELKNDLVLAAKLEHKNLVRLLG

VCLKEEKLLVYEYMPNISLLDTFLFDSDKRQQLDWRKRFMIIYGIARGLLYLHEESSQKIIHRDHTWEMNPKISD

FGLARAFGGDQSKDITRRRPVGTLGYMSPEYAYCGHVSTKSDMFSFGVIVLEMVTGRRNNGIYASTRTDSSECMD

SIYLLSYVWEKWRTRSLADAVDASLGGRYRENEVLSCVQIGLLCVQENPADRPDISAVVLMLSSNSMSLRTPSKP

AFFFGSGGLAVDAGAGHVLLGTDGTDDIADVGNKQQLSPNPVSETLVQILPSVTTPNKTGICGPSQGSNLNRAGV

SPD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	26	287	2.4e-14
Ser/Thr pkinase [Pfam fs]	34	139	2.3e-11
Ser/Thr pkinase [Pfam fs]	147	206	2.3e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	30	287	1e-19
Pto [L. esculentum]	30	287	2e-24
Rpg1 [Hordeum vulgare]	30	297	1e-30
Rpg1 [Hordeum vulgare]	30	284	2e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5492.m00171

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)