Report for 5527.m00174

 > 5527.m00174, length: 419, copies: 1 

MATRGSAGEAEGEASREVVFQAKDSGCRERNKITDIHGGLIIGGVAALALVLWFLLSCWKWKRVLNFFHKGTAGA

RRFEYRDLATATKNFSDDNKLGEGAFGVVYRGYLKQLDREVAVKKIVNELNVGHKDFFTEVITISEARHKNLVKF

YGWCIRGHSWNIIHFMCGWFWNTENKELFLVHELMKNGNLHEYLHNSEIAAVQSWPTRYKIAKDIGSALFYLHLD

CKPYILQRDIKPRNILLDENFHAKLADFGLSRIANPDNNAVLQTTVVGSAEEHVDVQTTAVGTEGYIDPQCKKGG

KVRFNCPSNVYSFGIVLLEIACRGKRREETCGLYRNKGDVVEAADTRLEIGADFERREMERLIILGLWCSAFETQ

HRPTMQKAMDVLECNAPLPDHNFITNSALASSDHDASGASTANI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	90	324	7.2e-39
Ser/Thr pkinase [Pfam ls]	90	387	3.6e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	40	384	5e-22
Rpg1 [Hordeum vulgare]	76	387	2e-24
Pto [L. esculentum]	77	388	7e-31
Rpg1 [Hordeum vulgare]	83	391	9e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	37	59	in -> out

Report for 5527.m00174

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)