Report for 5566.m00146

 > 5566.m00146, length: 381, copies: 2 

MVPILEHPNGSRDGYVASMSGFLLDWAGASGDCPKCVASGGQCTYGDGLRFACNCTDGLHPEKCGARSNLKKIAI

AQEEKQTRDLKDLMRSSSSMQSYSKYLELGGSPHIFTYEELEEATAGFSATRELGDGGFGTVYKGKLRDGRVVAV

KRLYKNNYRRVEQFLNEVDILSRLLHQNIVTLYGCTSRSSRDLLVVYEYIPNGTVADHLHGPRAGERGLTWPVRM

TIAIETAEALAYLHAVEIIHRDVKTKNILLDNNFHVKVADFGLSRLFPFEVTHVSTVPQGTPGYVDPVYHQCYKL

TDKSDVYSFGVVLIELISSKPAVDMSRSHSDINLANMALNRIQNHEVELVDPEIGCETDSETKRMLSGGRAGLSV

LADGHR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	123	321	2.5e-52
Ser/Thr pkinase [Pfam ls]	123	377	2.2e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	66	320	6e-19
Pto [L. esculentum]	80	364	4e-47
Xa21 [O. sativa]	106	226	4e-11
FLS2 [A.thaliana]	111	355	4e-29
Rpg1 [Hordeum vulgare]	111	320	4e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5566.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)