Report for 5725.m00190

 > 5725.m00190, length: 216, copies: 1 

MAPTSAGNLAPATAILVVVVAVVLAAAAASQDGDALTEFRKGMSDPDGALASWDPDLVNPCTWFRVTCNADNRVI

RLDLEEMNLSGHLSADLARLDQLQFMEIASNNIEGPIPPEFGNLENLISLDLCNNTISGPIPPSLGKLKSLKFMR

IDHNLLTGPIPNELAGLSNLMILNVSNNDLCGTIPTSGPFDHFPPSSFASNPRLRYPGMDDDDTGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	97	120	1.8
LRR [Pfam ls]	121	144	0.087
LRR [Pfam ls]	145	168	3.1
LRR [Pfam ls]	169	202	4.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	73	96	1.9
LRR [sensitive, ls]	73	96	53
LRR [sensitive, ls]	97	120	0.068
LRR [sensitive, ls]	97	120	1.8
LRR [sensitive, ls]	121	144	0.0032
LRR [sensitive, ls]	121	144	0.087
LRR [sensitive, ls]	145	168	0.11
LRR [sensitive, ls]	145	168	3.1
LRR [sensitive, ls]	169	202	0.17
LRR [sensitive, ls]	169	202	4.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	3	185	2e-15
Xa21 [O. sativa]	11	187	1e-19
FLS2 [A.thaliana]	22	185	1e-21
FLS2 [A.thaliana]	60	185	2e-15
Xa21 [O. sativa]	69	185	1e-14
FLS2 [A.thaliana]	70	183	2e-13
Xa21 [O. sativa]	72	194	5e-17
Xa21 [O. sativa]	73	187	4e-12
CLV2 [A. thaliana]	74	185	3e-12
FLS2 [A.thaliana]	74	204	6e-14
FLS2 [A.thaliana]	74	185	9e-13
FLS2 [A.thaliana]	74	185	5e-12
Cf-9 [L. pimpinellifolium]	76	187	2e-12
CLV2 [A. thaliana]	77	201	5e-13
CLV2 [A. thaliana]	77	184	2e-12
FLS2 [A.thaliana]	77	185	5e-14
FLS2 [A.thaliana]	77	184	6e-14
FLS2 [A.thaliana]	77	185	8e-14
FLS2 [A.thaliana]	77	187	9e-11
FLS2 [A.thaliana]	77	187	9e-11
FLS2 [A.thaliana]	77	185	1e-10
FLS2 [A.thaliana]	78	201	9e-11
FLS2 [A.thaliana]	83	187	1e-12
FLS2 [A.thaliana]	83	185	8e-12
Cf-9 [L. pimpinellifolium]	95	205	8e-14
Xa21 [O. sativa]	101	187	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 5725.m00190

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)