Report for 5754.m00082

 > 5754.m00082, length: 387, copies: 1 

MATGEWGGDRRGGGDGFKGGNVVNNKKRTVIKVLLPVTAACLLLLMSMFLVWLRKCRGKRQNKVVQKRMLGYLSA

LNELGDENLELPFVSFGDIAAATNNFSDDNMLGQGGFGKVYKGMLGDNKEVAIKRLSKGSGQGVEEFRNEVVLIA

KLQHRNLVKLLGCCIHGDEKLLIYEYLPNKSLEAFIFGTVQKHTMRSNKLHSMLTDREILLFLKKYLKIPKFYTK

IFGTLRYLVSEDPASKYALDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKSSNILLDVDMSPKISDFGMARIF

GGNQQEANTNRVVGTYGYMSPEYAMDGAFSVKSDTYSYGVILLEIVSGLKISLPRLMDFPNLLAYAWSLWKDDKA

MDLVDSSIAESC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	101	186	3e-16
Ser/Thr pkinase [Pfam ls]	101	387	3.7e-35
Ser/Thr pkinase [Pfam fs]	230	348	4.4e-29

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	23	224	4e-12
FLS2 [A.thaliana]	25	347	1e-26
Rpg1 [Hordeum vulgare]	62	348	3e-31
Pto [L. esculentum]	72	385	2e-42
Rpg1 [Hordeum vulgare]	92	360	4e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	30	52	in -> out

Report for 5754.m00082

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)