Report for 5768.m00102

 > 5768.m00102, length: 939, copies: 1 

MAALFLLLLLLHVSDAAINPGDLSVLHDLRRSLTNADAVLGWGDPNAADPCAAWPHISCDRAGRVNNIDLKNAGL

SGTLPSTFAALDALQDLSLQNNNLSGDLPSFRGMASLRHAFLNNNSFRSIPADFFSGLTSLLVISLDQNPLNVSS

GGWTIPADVAAAQQLQSLSLNGCNLTGAIPDFLGAMNSLQELKLAYNALSGPIPSTFNASGLQTLWLNNQHGVPK

LSGTLDLIATMPNLEQAWLHGNDFSGPIPDSIADCKRLSDLCLNSNQLVGLVPPALESMAGLKSVQLDNNNLLGP

VPAIKAPKYTYSQNGFCADKPGVACSPQVMALLHFLAEVDYPKRLVASWSGNNSCVDWLGISCVAGNVTMLNLPE

YGLNGTISDSLGNLSELSDINLIGNNLTGHVPDSLTSLRLLQKLDLSGNDLTGPLPTFSPSVKVNVTGNLNFNGT

APGSAPSKDTPGSSSSRAPTLPGQGVLPENKKKRSAVVLATTIPVAVSVVALASVCAVLIFRKKRGSVPPNAASV

VVHPRENSDPDNLVKIVMVDNDGNSSSTQGNTLSGSSSRASDVHMIDTGNFVIAVQVLRGATKNFTQDNVLGRGG

FGVVYKGELHDGTMIAVKRMEAAVISNKALDEFQAEIAILTKVRHRNLVSILGYSIEGNERLLVYEYMSNGALSK

HLFQWKQFELEPLSWKKRLNIALDVARGMEYLHNLAHQCYIHRDLKSANILLGDDFRAKVSDFGLVKHAPDGNFS

VATRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELITGMTAIDESRLEEETRYLASWFCQIRKDEDRLRAAI

DPTLDQSDETFESISVIAELAGHCTSREPTQRPDMGHAVNVLVPMVEKWKPVNDETEDYMGIDLHQPLLQMVKGW

QDAEASMTDGSILSLEDSKGSIPARPAGFAESFTSADGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	88	110	0.055
LRR [Pfam ls]	111	134	0.029
LRR [Pfam ls]	164	187	0.046
LRR [Pfam ls]	188	211	2.4
LRR [Pfam ls]	415	437	1.9
Ser/Thr pkinase [Pfam fs]	590	796	2.6e-54
Ser/Thr pkinase [Pfam ls]	590	869	3.3e-52

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	64	87	2.9
LRR [sensitive, ls]	64	87	58
LRR [sensitive, ls]	88	110	0.0027
LRR [sensitive, ls]	88	110	0.055
LRR [sensitive, ls]	111	134	0.0015
LRR [sensitive, ls]	111	134	0.029
LRR [sensitive, ls]	135	163	4.7
LRR [sensitive, ls]	135	163	94
LRR [sensitive, ls]	164	187	0.0023
LRR [sensitive, ls]	164	187	0.046
LRR [sensitive, ls]	188	211	0.12
LRR [sensitive, ls]	188	211	2.4
LRR [sensitive, ls]	238	261	0.58
LRR [sensitive, ls]	238	261	12
LRR [sensitive, ls]	262	285	0.74
LRR [sensitive, ls]	262	285	15
LRR [sensitive, ls]	286	308	1.5
LRR [sensitive, ls]	286	308	30
LRR [sensitive, ls]	367	390	5.9
LRR [sensitive, ls]	367	390	120
LRR [sensitive, ls]	391	414	0.64
LRR [sensitive, ls]	391	414	13
LRR [sensitive, ls]	415	437	0.096
LRR [sensitive, ls]	415	437	1.9

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	1	454	2e-29
Cf-9 [L. pimpinellifolium]	7	454	9e-18
Xa21 [O. sativa]	14	302	6e-19
CLV2 [A. thaliana]	26	452	3e-24
FLS2 [A.thaliana]	54	431	3e-23
Cf-9 [L. pimpinellifolium]	55	302	2e-11
FLS2 [A.thaliana]	57	457	2e-26
Cf-9 [L. pimpinellifolium]	64	448	9e-28
Cf-9 [L. pimpinellifolium]	64	433	2e-24
CLV2 [A. thaliana]	65	433	2e-16
FLS2 [A.thaliana]	65	870	1e-66
CLV2 [A. thaliana]	68	428	5e-19
FLS2 [A.thaliana]	68	458	7e-26
FLS2 [A.thaliana]	75	454	6e-25
Xa21 [O. sativa]	75	702	5e-37
CLV2 [A. thaliana]	135	431	6e-14
Pto [L. esculentum]	548	861	1e-49
Rpg1 [Hordeum vulgare]	576	873	9e-23
Rpg1 [Hordeum vulgare]	579	891	3e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5768.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)