Report for 5780.m00029

 > 5780.m00029, length: 314, copies: 1 

MELVVGASEATMKALLGKLGNLLAQEYALIRGVRGDIQYISDEMASIHAFLTNLSSSGNDDGHDAQTKDWMKQVR

DIAYDMEDCVDDFAHRLRHDPRGDGCLVEVYRALYEIYTCRPRCDIAAKLAELKNRAQQVGERRLRYGVVLNPIP

PQRGETRNGDQTTGENQVAGRRLITVKEPIGVARAIEKLEAWMKSQSHKNRGVLAIHGFGGGGKSTIAAALYRKH

GQNFDCRAWVTMPQKFDDRAVLRSILSQVMLPATASGGGDRRRRGGSRHAKIETMSQEQLIKGLKNHLQNKRYLP

TTLTERFYIECILH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	180	251	1.1e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	299	2e-20
Pi-ta [Oryza sativa]	4	298	4e-16
RPM1 [A. thaliana]	8	299	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5780.m00029

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)