Report for 5780.m00034

 > 5780.m00034, length: 328, copies: 1 

MSAILHDQTRFEPVVARTMGKFSIEAFMQLGVSDEINWLKGTVSSIKKTLADADYSALKDDTVRSWSRKLKDVMY

EAADILDVCDEMEGEEHGGRSRNSPVALCLPIQGHKIRRQVKALRQKADAILEEGKIFDLTHVRSDEDHNVDATT

ACHVPIPRTNVVGRVQETRMLVDKLTGKGISGPGMTGQNVEVIAIVGMGGIGKTTLAREIFTNDMIQGKFDKRLW

ITISKGNNSISLLQQVIQGLGCEHEGIRDSAVLEHIISSEVRRKKVFLVMDDVWEARGVVDIFKKSFVGNAQAGS

RILITTRSKQVAQEMQAAIVHEVSKLSS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	156	327	6.5e-27

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	39	315	1e-19
Xa1 [Oryza sativa]	147	315	4e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5780.m00034

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)