Report for 5784.m00036

 > 5784.m00036, length: 382, copies: 1 

MGILIQKEGLMIGLIVSGGSLLLLLGFAAPFILISRNTYFAERMIINLEELEKATNNFDKTREVGDGGHGVVYKG

IIDLHVVAIKKSKIVVQREIDEFINEVTILSQVNHRNVVKLLGCCLETEVPLLVYEFISNGTLYHHLHVDGPVSL

SWDDRLRITVEVARALSYLHSAASMPIFHRDIKSSNILLDDSLTAKVSDFGTSRYISINQTGITTAVQGTVGYLD

PMYYYTGRLTSKSDVFSFGVLLMELLTRKKPVGDTFDNGHNLVSHFVLVFSEGNLYDIIDPQVKEEDDGEALEVA

TLAIACTKFKGEDRPTMREVEMALENIASKKGLFHNGNTTASRRPDENQNSTLYMSVEGVTKEAITESTTEEEIL

LSSRFAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	58	223	1.2e-38
Ser/Thr pkinase [Pfam ls]	58	320	2.8e-39
Ser/Thr pkinase [Pfam fs]	235	256	0.00056

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	48	325	4e-50
FLS2 [A.thaliana]	49	334	9e-40
Rpg1 [Hordeum vulgare]	49	331	2e-30
Rpg1 [Hordeum vulgare]	51	327	5e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	12	34	in -> out

Report for 5784.m00036

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)