Report for 5795.m00173

 > 5795.m00173, length: 438, copies: 2 

MAGGMSDGSGAATTAGGVGDGSDAGGGNSNCVDDIKGGYRCKCSHGYEGNPYIKDGCKDINECLDNATYPCMGIC

KNTIGSFDCSCYPGSYMKNGFCLPNQKSTFPARHVIGASVGFVILVIAITFACYVQQRRKLQHIKNNYFQQHGGL

ILFEEMKSQQGHAFKIFSEEELQQATKKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKKEFGPMLV

YEFIPNGTLFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILHGDVKSSNILLDNNFSAKVSDFGASI

LAPTDEMQFVTLVQGTCGYLDPEYMQTCQLTDKSDENKLEDMLNDQIKNNENMEFLEEMAELARKCLDMSSINRP

SMKEIGDELGRLRKVMEHQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	179	208	7.8e-06
Ser/Thr pkinase [Pfam ls]	179	385	6.6e-13
Ser/Thr pkinase [Pfam fs]	222	299	7.2e-17

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	97	388	2e-16
Pto [L. esculentum]	167	394	9e-26
Rpg1 [Hordeum vulgare]	167	387	2e-19
Rpg1 [Hordeum vulgare]	172	396	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	108	130	out -> in

Report for 5795.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)