Report for 5822.m00128

 > 5822.m00128, length: 434, copies: 1 

MASPAVYVIATIIFVVAFAALLVKVYRGAESCGAAVAAEMKATAHYAVVPDAAMRSATVERFLWEMAHEKPIRFT

PRQLAGFTRGYSARLGAGVFGTVYGGALPNGLAVAVKVLRGGMDRRRSEEQFMAEVGTIGRTHHINLVRLFGFCY

DAAVRALVYEYMGNGALDAYLFDLSRDVGVPARRAIAIGVARGLRYLHEECEHKIVHYDIKPGNVLLDGGMTPKV

ADFGLARLVNRGDTHVSVSGMRGTPGYAAPETLMQSGVTEKCDVYSFGMLLLKIVGRRRNFDEAAPESQQWWPME

AWARYERGELMMVDDAAAAINHPSDEICSGSDGEAVVTVAEADDERRCKEAVVRMYQVAFWCVQQRPEARPPMGA

VVKMLEGEMDVAPPVNPFLHLMAAPAPVPNPWATTTASSGNAVSENVVVSHGSDGIVSL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	84	382	6.7e-39
Ser/Thr pkinase [Pfam fs]	89	276	2.1e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	73	380	2e-31
Pto [L. esculentum]	73	381	9e-32
Rpg1 [Hordeum vulgare]	90	290	5e-27
Rpg1 [Hordeum vulgare]	93	286	2e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	4	26	out -> in
putative TM domain	89	111	in -> out

Report for 5822.m00128

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)