Report for 5862.m00121

 > 5862.m00121, length: 350, copies: 1 

MQSPSERKEKDDSMLPSNAKEVEELRRESARNPLIAFTFEELKRITKNFRQDSLLGGGGFGRVYKGYITSDLREG

LTIEEPLRVAVKVHDGDNSFQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDDHRVLVYEFMPLGSVESHLFSRVM

VPLPWFTRMKIALGAAKGLAFLHEAEKPVIYRDFKTSNILLDEEYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYG

YAAPEYIMTGHLTAMSDVYSYGVVLLELLTGRKSLDKSRPVREQTLADWAFPMLIQKKKVLGIVDPRLAEDYPVK

AVQKTAMLAYHCLNRNPKARPLMRDIVATLEPLQQMEEDPSISLVSGTEV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	49	330	1.1e-47
Ser/Thr pkinase [Pfam ls]	49	327	8.7e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	8	334	5e-24
Rpg1 [Hordeum vulgare]	33	337	9e-20
Pto [L. esculentum]	37	338	6e-51
Rpg1 [Hordeum vulgare]	37	258	6e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5862.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)