Report for 5905.m00145

 > 5905.m00145, length: 849, copies: 1 

MAMMDGNHIMPISGQGGTWALGAVQWCRWQEGNKFERCWRNTFGAAEFHLYAGPVWNLGYNYLTGAVPSFFGKFT

FMKYLAFPFNALSGPLPKELGNLTNLLSLGISFNNFSGQLPKELGNMTNLQQMYIDSCGFSGPFPSTFSKLQNLK

ILRSSDNDFTGKIPDYLGIMPKLEDIRIGDIVNGSSSLAFISNLTSLSNLILRNCKISGNLAPVDFSKFGVLTLL

DLSFNNITGQIPQTILNMTNLEFLFLGNNSFTGSLPDAISPSLKAIDFSYNQLTGGLPSWATQNNFQLNLVANNF

ELGTIGHSTLPSGLNCLQQDTPCFRGSAEYYSFAVDCGNNRTTRGLDGTIYEPDAANLGAASYYVTSDTRWGVSN

VGNYFLATDGVNIINSPQKIQNVLDSRLFETARMSASSVRYYGLGLENGNYTVLLQFAEFAYPDSQTWLSLGRRV

FDIYVQGDLKEKNFDIRKMAGGKSFTAVNRSYTARVSKNFLEIHLFWADFTPTVRNGVPKRRSKAGAIAGITIGA

LVLGVVSLFGIFLLVKKRRTIAEQQEELYNLAGQPDVFSNTELKLATDNFSYQNIIGEGGYGPVYKGKLPDGRVI

AVKQLSETSHQGKSQFVTEVATISAVQHRNLVKLHGCCIDSKTPLLVYEYLENGSLDRAIFGIARGLTYLHEESS

VRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKKTHVSTRIAGTMGYLAPEYAMRGHLSEKADVFAFGVLMLE

TVAGRSNTNNSLEESKIYLLEWAWGLYEMGQALRVVDPCLKEFDEKEAFRVICIALLCTQGSPHQRPPMSRVVAM

LIGDVDVAEVVTKPSYITEWQLRD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	100	123	0.9
LRR [Pfam ls]	196	220	2.2
LRR [Pfam ls]	221	244	0.15
LRR [Pfam ls]	245	265	5.3
LRR [Pfam ls]	267	291	4.7
Ser/Thr pkinase [Pfam fs]	575	660	2.2e-17
Ser/Thr pkinase [Pfam ls]	575	828	3.8e-36
Ser/Thr pkinase [Pfam fs]	663	754	5.8e-25

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	100	123	0.033
LRR [sensitive, ls]	100	123	0.9
LRR [sensitive, ls]	124	147	0.29
LRR [sensitive, ls]	124	147	7.9
LRR [sensitive, ls]	196	220	0.082
LRR [sensitive, ls]	196	220	2.2
LRR [sensitive, ls]	221	244	0.0055
LRR [sensitive, ls]	221	244	0.15
LRR [sensitive, ls]	245	265	0.2
LRR [sensitive, ls]	245	265	5.3
LRR [sensitive, ls]	267	291	0.17
LRR [sensitive, ls]	267	291	4.7

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	54	283	6e-16
CLV2 [A. thaliana]	55	314	7e-21
CLV2 [A. thaliana]	55	262	4e-11
FLS2 [A.thaliana]	55	312	4e-21
FLS2 [A.thaliana]	55	312	8e-23
FLS2 [A.thaliana]	55	280	2e-19
FLS2 [A.thaliana]	55	276	2e-17
Xa21 [O. sativa]	55	283	6e-22
Cf-9 [L. pimpinellifolium]	57	350	2e-21
Cf-9 [L. pimpinellifolium]	57	300	8e-16
Cf-9 [L. pimpinellifolium]	57	362	3e-14
Cf-9 [L. pimpinellifolium]	57	261	1e-13
FLS2 [A.thaliana]	57	299	2e-25
Xa21 [O. sativa]	57	283	6e-24
CLV2 [A. thaliana]	58	326	2e-15
FLS2 [A.thaliana]	58	283	3e-26
Xa21 [O. sativa]	58	283	3e-27
FLS2 [A.thaliana]	60	305	5e-27
FLS2 [A.thaliana]	61	283	1e-27
FLS2 [A.thaliana]	61	287	1e-21
Xa21 [O. sativa]	61	267	4e-19
CLV2 [A. thaliana]	63	305	9e-13
FLS2 [A.thaliana]	63	284	7e-19
Xa21 [O. sativa]	63	264	2e-22
CLV2 [A. thaliana]	87	300	1e-13
FLS2 [A.thaliana]	100	305	9e-13
CLV2 [A. thaliana]	101	319	2e-15
Xa21 [O. sativa]	127	289	5e-13
FLS2 [A.thaliana]	513	827	2e-40
Pto [L. esculentum]	563	823	6e-46
Rpg1 [Hordeum vulgare]	568	823	1e-32
Rpg1 [Hordeum vulgare]	568	834	9e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	518	540	out -> in

Report for 5905.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)