Report for 5939.m00147

 > 5939.m00147, length: 999, copies: 1 

MPWRLVPCGRGQLFLVVLGLLLLLLGEVHHGSGARTASLPRLLPAEVRTLRRIAQKMGILRWNFSVDPCNSGGNG

GFGGTVNCDCSFYNHTFCHVTNITLEGQNFTGELPPDFAEFPNLLQLDLSRSLLHGGVPDQWARMKLQGLSLMGN

NLSGPFPIALTKITTLTNLSIEGNNFYGPIPSDIGHLMQMEKLILSANEFSGPLPAALARLTNLTDLRISGNNFS

GRVPVFLGKLKKLGKLQIEGSLLEGPIPSEFSKLINLYDLRISDLRGRGSVFPDLRELVSMKTIILRNCSINGSI

PSYIGNMDNLKHLDLSFNKLTGEIPASFANMGHVDHIYLTGNSLTGSIPDWILKRNKIANMVESYSPEMSSLTNV

ESCLKRNFPCGSSNGKYRYSLNINCGDKEVTINGTKYETDVEPKGASLLYQSPGSNWAFSSTGNFMDNNINDDSY

IATSASKLTVPNSELYAKARLSPLSLTYYGLCMHNGSYTVKLHFAEIVFTNDSTYCSLGKRRFNVFIQGRMVLED

FDIEQSAGGAAKAVIKTFTANVTNHTLEIHFYWAGRGTTGIPKRGYYGPLISAISVVPNFEVPLAVEPPQIGGSK

KLSRISKAFLVAMPILAMCAALFVGIYWIKWRRKNSMHKDLRAFDLQTGSFTLRQIKVATRNFDAANKIGEGGFG

SVYKGLLSDGTIIAVKQLSSRSKQGNREFVNEIGMISALQHPNLVKLYGCCTEGNQLLLVYEYMENNCLARALFG

TVEQYRLSLDWPTRRKICLGIARGLAYLHEESAIRIVHRDIKASNILLDKDLSAKISDFGLAKLNDDDHTHISTR

IAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSYRPKEDFVYLLDWACVLHERGNLLELVDPELGS

DYSTEEALLMLNVALLCTNAAPTLRPKMTKVLSLLEGHIPLQPFLSDLSLAANSLSSSGQRRNFWQTLSDQSQSM

TAAQASSSNTNESSSLDIAGSLRP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	165	188	5.1
LRR [Pfam ls]	213	236	0.13
LRR [Pfam fs]	309	332	2e-05
LRR [Pfam ls]	309	332	0.00033
LRR [Pfam ls]	333	357	1.6
Ser/Thr pkinase [Pfam fs]	663	862	1.3e-59
Ser/Thr pkinase [Pfam ls]	663	937	7.6e-55

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	94	117	0.21
LRR [sensitive, ls]	94	117	5.4
LRR [sensitive, ls]	118	141	0.34
LRR [sensitive, ls]	118	141	8.7
LRR [sensitive, ls]	165	188	0.2
LRR [sensitive, ls]	165	188	5.1
LRR [sensitive, ls]	189	212	0.23
LRR [sensitive, ls]	189	212	5.9
LRR [sensitive, ls]	213	236	0.005
LRR [sensitive, ls]	213	236	0.13
LRR [sensitive, ls]	237	260	0.86
LRR [sensitive, ls]	237	260	22
LRR [sensitive, ls]	285	308	0.5
LRR [sensitive, ls]	285	308	13
LRR [sensitive, ls]	309	332	1.3e-05
LRR [sensitive, ls]	309	332	0.00033
LRR [sensitive, ls]	333	357	0.062
LRR [sensitive, ls]	333	357	1.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	46	391	2e-25
CLV2 [A. thaliana]	65	377	7e-18
Xa21 [O. sativa]	73	350	1e-30
FLS2 [A.thaliana]	89	352	7e-29
Cf-9 [L. pimpinellifolium]	91	349	3e-25
CLV2 [A. thaliana]	94	349	6e-22
FLS2 [A.thaliana]	94	361	7e-32
FLS2 [A.thaliana]	94	465	6e-30
FLS2 [A.thaliana]	94	366	4e-28
FLS2 [A.thaliana]	94	354	5e-28
FLS2 [A.thaliana]	94	349	8e-28
Xa21 [O. sativa]	94	349	3e-30
Xa21 [O. sativa]	94	352	1e-21
Cf-9 [L. pimpinellifolium]	98	349	7e-21
CLV2 [A. thaliana]	98	390	1e-27
Xa21 [O. sativa]	98	361	9e-30
Xa21 [O. sativa]	98	376	5e-25
Cf-9 [L. pimpinellifolium]	100	374	1e-20
FLS2 [A.thaliana]	100	350	3e-31
FLS2 [A.thaliana]	105	352	2e-31
CLV2 [A. thaliana]	106	349	9e-19
FLS2 [A.thaliana]	106	935	6e-70
Xa21 [O. sativa]	119	339	8e-21
CLV2 [A. thaliana]	123	362	5e-16
FLS2 [A.thaliana]	141	349	7e-16
FLS2 [A.thaliana]	142	361	2e-26
Xa21 [O. sativa]	145	412	2e-23
Xa21 [O. sativa]	166	349	2e-18
Rpg1 [Hordeum vulgare]	647	935	3e-34
Pto [L. esculentum]	651	942	7e-58
Rpg1 [Hordeum vulgare]	651	936	4e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	13	32	in -> out
putative TM domain	610	629	out -> in

Report for 5939.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)