Report for 5984.m00143

 > 5984.m00143, length: 395, copies: 1 

MPQSSSKYSPHLLVPKLLALEAAVIASWSCTLAIHSDLVFACCLYTALKNIKNTKMELVVGASTATMDSLLGKLG

NLLAQEYDLIRGVRGDIQYISDELASMKAFLLDLAREDPDNRKKHWMKQIRDMAYDCEDCIDDFAHRLPNDSLDA

KCCPWIVTLVYDLWTFGPRREIASSIAELKVRAQLIADRRIRYGVENPNTQKGKGPPDATSYDIAEDQLASHELG

MNEPVGMEKAMKDLEEWVDGTACQEPAVVSIVGFGGVGKTTIAMALYKKVMYQFDCRAWVTVSQNYDLDAVLNDI

LKQIDPDYRQQCSSKTGTSENIKTLARFGSKLKRDVQRTGSLRQSSPRSIEETSNLKRTETTDNKLESQIKKLLD

KKRCVHPSIHLSISISISIY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	213	307	1.2e-15

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	56	301	2e-23
Pi-ta [Oryza sativa]	59	325	4e-15
RPM1 [A. thaliana]	63	303	4e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5984.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)