Report for 5996.m00144

 > 5996.m00144, length: 455, copies: 1 

MEEKLQRLLLRVQIILEEAEDRHIANQAMLQQLNILRKEMYRGYYILDKFRYHDREEENTKDHQVSNSFAPSKFN

PAKRIRFCRTSGQSLQQQLQQVLASLEATIEDTSEFFMFLNSYPRLNRQPYSTHLVLDKCLFNRQMEMEHIMNFL

LKDNTSSNQNPGVLPIIGPSNVGKSTLIEHACNDERVRNHFFQIVCFSVDDLEDANMVTLRNCGVIKHQNHATGG

ERILIIVELIRDINEGAWRRLYSASKTCAANGSKIIVASRSDSISSFGTTHALRVKFFTQEAYWYFFKVRTFGSM

DAAEHPKLESIAVDMAMELNGCFMGSNVYSVLLRENFNDKFWSMALARIREFRKLNLLLCGTSNFDDPWQGVGPA

YVRRVNKICSGNHVIHEDYKVCSIQNMIHCHTNSAHSEDDVPMEEEISEAFHLTISDADAGERCHVGPKQNEHCH

YRVHA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	120	191	3e-06
NB-ARC [Pfam ls]	120	421	4.5e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	3	424	8e-23
Xa1 [Oryza sativa]	90	355	5e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	1	21

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)