Report for 6029.m00166

 > 6029.m00166, length: 649, copies: 1 

MHDGQNSPVEFLSVPPLQVRLKPQEHRKGMPPSHLFQFSIASRVRLASALLSPKGVNYEVQALMMIKTSLKDPHG

VLKNWDQDSVDPCSWTMVTCSPENLVTGLEAPSQNLSGLLSASIGNLTNLEIVLLQNNNINGPIPEEIGRLTKLK

TLDLSSNHFSGGIPNSVGHLESLQYLRLNNNTLSGAYPSSSANLSQLVFLDLSYNNLSGPVPGSLARTFNIVGNP

LICAAGTEHDCYGTLPMPMSYSLNNTQGTLMPAKSKSHKVAIAFGSTIGCISFLIPVMGLLFWWRHRRNHQILFD

VDEQHTENVNLGNVKRFQFRELQVATENFSNKNILGKGGFGNVYRGKLPDGTVVAVKRLKDGNAAGGQAQFQTEV

EMISLALHRNLLRLYGFCMTATERLLVYPYMSNGSVALRLKGKPPLDWITRQRIALGAARGLLYLHEQCDPKIIH

RDVKAANILLDDYCEAIVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ

TALEFGKSSNQKGAMLDWVKKMHQEKKLDVLVDKGLRSNYDRVELEEMVQVALLCTQYLPGHRPRMSEVVRMLEG

DGLAERWEASQRADSHKFKVPEFTFGRCYSDLTDDSSLLVQAVELSGPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	124	147	2
LRR [Pfam ls]	148	171	0.027
LRR [Pfam ls]	172	195	1.5
LRR [Pfam ls]	196	219	0.73
Ser/Thr pkinase [Pfam fs]	329	526	1.4e-47
Ser/Thr pkinase [Pfam ls]	329	600	1.6e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	124	147	0.095
LRR [sensitive, ls]	124	147	2
LRR [sensitive, ls]	148	171	0.0013
LRR [sensitive, ls]	148	171	0.027
LRR [sensitive, ls]	172	195	0.074
LRR [sensitive, ls]	172	195	1.5
LRR [sensitive, ls]	196	219	0.035
LRR [sensitive, ls]	196	219	0.73

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	8	221	7e-13
Xa21 [O. sativa]	26	221	9e-12
FLS2 [A.thaliana]	51	280	1e-27
Xa21 [O. sativa]	62	217	3e-23
FLS2 [A.thaliana]	96	598	1e-54
FLS2 [A.thaliana]	99	217	2e-15
FLS2 [A.thaliana]	101	211	2e-15
FLS2 [A.thaliana]	101	267	7e-16
FLS2 [A.thaliana]	101	212	4e-12
Xa21 [O. sativa]	101	411	2e-25
Xa21 [O. sativa]	101	212	2e-13
Cf-9 [L. pimpinellifolium]	104	212	5e-14
FLS2 [A.thaliana]	104	247	1e-17
FLS2 [A.thaliana]	104	252	1e-14
FLS2 [A.thaliana]	106	217	2e-13
FLS2 [A.thaliana]	108	215	9e-16
Cf-9 [L. pimpinellifolium]	110	222	4e-12
FLS2 [A.thaliana]	110	215	2e-14
Xa21 [O. sativa]	113	255	1e-13
CLV2 [A. thaliana]	130	257	5e-12
Rpg1 [Hordeum vulgare]	310	622	3e-35
Pto [L. esculentum]	316	599	6e-46
Rpg1 [Hordeum vulgare]	322	625	1e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	267	289	in -> out

Report for 6029.m00166

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)