Report for 6161.m00209

 > 6161.m00209, length: 368, copies: 1 

MARPRPPGLIAVAAAAALVAWCLCGPASAAAAAGAAAAGTSASGGGGGAAAKRGGRRDEHGRLVFVQESRKRFEI

EDLLRASAEVLGSGNFGSSYKATLQERPAVVVKRFKDMNGVGREDFSEHMRRLGRLSHPNLLPVVAYLYKKDEKL

LITDYITNGSLAHFLHGNRGSELDWGKRLRIIRGTARGLGHLYDELPMLTVPHGHLKSSNVLLDGDMEAVLSDYA

LVPVVTASAAAQVMVAYKAPECVAAAAAGKPSKKSDVWSLGILILEVLTGKFPANYLRQGRQDNADLAGWVSSVF

SEERTGEVFDKDMARRRRRRRGRHAQAAPRRPRLLRRRRRPEVGAQDGDRAHRGDQGSGPHPHPRRRR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	80	278	7.9e-20
Ser/Thr pkinase [Pfam ls]	80	334	4.7e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	71	288	9e-16
Pto [L. esculentum]	72	344	1e-24
Rpg1 [Hordeum vulgare]	81	276	1e-12
Rpg1 [Hordeum vulgare]	85	288	4e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 6161.m00209

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)