Report for 6246.m00039

 > 6246.m00039, length: 379, copies: 1 

MYDDRKDFNRIDGEFEVVPVVLDGTIRNVYNYACRSSRRTPATARGTGAIAPRATRATPYLDDGCTDINECLHPK

EYGCYGNCMNTPGGYTCVCPPGTSGNPTEMNGCHSKDKFTFVVKKRKLIRTKQKFFEQNVGVILQQQMHSGGGAR

GFRIFSMEELKKATNIFAAGHVLGRGGHGVVYKGVLEDKTIVAIKKSKMMKEAQTKEFARETSLVAALKLKCPCW

STNSSQITPSTTTSMGRTPKADIPLDIRLQIAAESAEALSYMHSSASPPTLHGDVKMANILLDDKLSAKVSDFGA

SKLPPTDEIEIATWVQGTCEYLDPEYLMTRQLTDKSDVYSFGVIVLELLTRKKVLYLDGPEEDRSLVSCFTTAVK

VGRH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	167	216	2.3e-06
Ser/Thr pkinase [Pfam ls]	167	379	5.5e-11
Ser/Thr pkinase [Pfam fs]	261	355	2.9e-17

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	153	353	4e-21
FLS2 [A.thaliana]	155	378	3e-20
Pto [L. esculentum]	155	362	5e-26
Rpg1 [Hordeum vulgare]	155	353	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6246.m00039

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)