Report for 6310.m00176

 > 6310.m00176, length: 266, copies: 1 

MAHTMVSVATGVLCPVIGKLSTLLQMKYNRLKGVDNEILSLKDELSSMNALLLKLEDIDDLDIQVKEWRDQIREL

SYDIEDRVDYFMYQVDGDAHRRESIKGDKMAHQIIKLKARVDMASERRKRYNFDETLSSSIGVVPIDPRLPALYA

EKENLVGIDTPRVELIRFLTEGEDKLLQKLQVVSIVGLGGLGKTTLARQVYEKIGGQFDCQAFVSVSQKPDIRKI

FKNILINITELDYGAIDAWDEERLINKLREFLNDKRLNFNG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	140	261	9.3e-19

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	6	261	2e-42
RPM1 [A. thaliana]	17	261	2e-11
Pi-ta [Oryza sativa]	32	261	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	55	76

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6310.m00176

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)