Report for 6353.m00041

 > 6353.m00041, length: 420, copies: 1 

MAKLAVPPLLVILVLLQSATRLPVAETSTADEEYMHRLPAATGAERLLGWKADSDPCNGSWVGVTCAPFDGNRII

QIDVRGLLRGGGTLPELDRQAGSLSHLRMLDLGDNNLTGPVPTLFLDRLLTLRLDGNAFSGLPHSFFRGMPELHY

FSISDNPRLEEWGLWSDLLSLTELRVFNASNANIXGTLQVFLGNLGAFPALAEVSLARNRLTGVVPEKLGPVPEL

PDSVKTDFAEAAVKGSFCRLDVHGPCDQETSSLLSVAAAFHYPEILDVSWRRDDPCNGWLGIHCGDGDGGGGGRN

KVTGVNLSRLGLNGTIDPAFASLLYLEAIILAGNNLTGTVPASILQMPSLRVLDVSNNALEGTVLSVRHDVLILA

DGNRGGLNVTAIAASGSFSSSRFQLSEATTPFLTFATVFVALFGY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	101	120	5.4
LRR [Pfam ls]	123	146	0.022

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	101	120	0.17
LRR [sensitive, ls]	101	120	5.4
LRR [sensitive, ls]	123	146	0.0007
LRR [sensitive, ls]	123	146	0.022
LRR [sensitive, ls]	173	196	1.7
LRR [sensitive, ls]	173	196	54
LRR [sensitive, ls]	200	223	1.5
LRR [sensitive, ls]	200	223	48
LRR [sensitive, ls]	301	324	1.6
LRR [sensitive, ls]	301	324	51
LRR [sensitive, ls]	325	348	0.4
LRR [sensitive, ls]	325	348	12
LRR [sensitive, ls]	349	371	0.43
LRR [sensitive, ls]	349	371	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	43	364	6e-14
CLV2 [A. thaliana]	60	364	3e-12
FLS2 [A.thaliana]	83	364	2e-13
FLS2 [A.thaliana]	91	364	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6353.m00041

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)