Report for 6404.m00139

 > 6404.m00139, length: 395, copies: 1 

MATRATAMGSADGSVSSTGSPLVSESKKKRIKTYIIASTSSLLGISVLVLAVFLVYKKHKCLLPWQRSTTAPRLH

SLLRSQLKSYTYSEVRKMTKSFTHTLGKGGYGTVYKGSLSDGSTIAVKILEDSNNDGEDFINEVSSIGRISHINV

VTLLGLCQHGSKRALIYEYMPNGSLDKFAVGGNDTMQQEKFLISWEKLYDILVGVAQGLDYLHHWCNHRVVHLDI

KPQNILLDQDFCPKISDFGLAKLCKPKESKISIGCARGTIGYMAPEVFWGHRGAVTTKSDVYSYGMLILHMVGER

ENINASTESGSKYFPEWLYDNLNQFCGVPSGGIDGSNSTSEVAHKLVIIGFWCIQSAPTDRPSMSEVIDMFDRSL

TELQLPPRISCCGNYNESFG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	95	297	3.2e-45
Ser/Thr pkinase [Pfam ls]	95	371	2.9e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	26	368	1e-36
Pto [L. esculentum]	80	368	2e-35
Rpg1 [Hordeum vulgare]	83	369	4e-31
Rpg1 [Hordeum vulgare]	85	373	7e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	34	56	in -> out

Report for 6404.m00139

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)