Report for 6458.m00150

 > 6458.m00150, length: 1078, copies: 1 

MAMILDAFASSLGDILIETMKEEASLMLGVSDEIRKLYDTLNSLKKFLQDAEKKHITSSYAQDWVRKLKGAMYEA

SDITDLVQIKAEERRISMDTSSGCFHSFLLCLQDPLFAHRIGSQIKSVNQKMDDLCKQAAQLNFITNLTDGNGKH

KVIDKTAPGLVPRDAVGKKLEQDTRMLVEVLTKEEKASGGESNNVHVVANSDTESNNVTVVAILGIGGIGKTTLA

KKIYSDQAVEDSFNTKIWLSVTQDFNEVDLLRTAIVAAGGDHCGAQEKSLLEPILVSALTAKKFLLVMDDIWNQK

PWEKVLRVPTIKAGARGSRVLITTRNEGVAREMNAVHLHHVSKLGPQEAWAMLKEQLDLSGPETKRLKESGMKIV

EKCDGLPLAIKVVGGVLCKRNKTENDWEKVLGNQVWSKIGLPDELNKAIYLSYEDLVPNLKQCFVYYSLFPKDEI

IGPDKVVAMWTAEGFLGNDGNSTQLGMDYYKELIMRNLLEPHDDYYNQEYCLMHDVVRSFAQYVARDEALVVGDT

ENMTNLTLSNFFRLSISANEIEWSNLQKRHSLRTLLLFGNIKFKPGNSLSNLPFLRTIHIRDARCATLIGSLCHL

KHLRYLELGYTNISALPQNIGKMKFLEHIGLRGCHSLAELPSSITELPKLRHLSIDETKINAIPRGFKRLENLEM

LWGFPVHIIIENTGEYRCSLEELGPLSKLRKLKLIGLENVPYSSMATLAKLKTKENLICLELWCTSGVTVSGRVK

ESIAMADQEQIVDVFDKLYPPLCLEELTIGGYFGDKLPSWIMMPAKFLKNMRRLDLQDMANCAHLPSGLGQLQDL

DCLVINRAPQIEQVGYDFFVQGGQRKTDNRNPSHAVFFPKLHELCLQGMIKWKEWTWEKHVEAMPVLSVLNIRNC

KLHYLPPGLSYQAKALRRLSIANVQHLNCLENFSSVIKLDAYDNPDLERIANLPNMQNLTVVGCPKLMVFNNVKS

LRSIQLGISEMETLPAYLQDTKLEQLEIACSLKLLKLMVKKESWSEWGKISNIMHVKGFASENGRRWYISYTKHP

FSFDTNIEYTLELPEETGYEANIAMEKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	171	471	3e-61
NB-ARC [Pfam fs]	207	471	1.2e-61
LRR [Pfam ls]	602	624	0.15
LRR [Pfam ls]	649	671	1.5
LRR [Pfam ls]	891	910	5.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	556	578	0.4
LRR [sensitive, ls]	556	578	10
LRR [sensitive, ls]	579	601	2.1
LRR [sensitive, ls]	579	601	53
LRR [sensitive, ls]	602	624	0.0059
LRR [sensitive, ls]	602	624	0.15
LRR [sensitive, ls]	625	648	0.43
LRR [sensitive, ls]	625	648	11
LRR [sensitive, ls]	649	671	0.059
LRR [sensitive, ls]	649	671	1.5
LRR [sensitive, ls]	800	823	0.64
LRR [sensitive, ls]	800	823	16
LRR [sensitive, ls]	891	910	0.2
LRR [sensitive, ls]	891	910	5.1
LRR [sensitive, ls]	935	957	0.57
LRR [sensitive, ls]	935	957	15
LRR [sensitive, ls]	975	997	2
LRR [sensitive, ls]	975	997	52

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	709	5e-49
I2 [L. esculentum]	13	967	8e-77
RPM1 [A. thaliana]	16	958	4e-47
Pib [Oryza sativa].	164	653	8e-47
L6 [L. usitatissimum]	180	741	1e-15
RPS2 [A. thaliana]	186	703	1e-34
M [L. usitatissimum]	190	518	6e-13
Xa1 [Oryza sativa]	205	1000	3e-49
N [N. glutinosa]	206	1044	8e-19
Pi-ta [Oryza sativa]	210	627	4e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	118	138

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6458.m00150

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)