Report for 6538.m00123

 > 6538.m00123, length: 865, copies: 1 

MRSAYHLMPLLAMLLILVLADHTSSTEAVAPAACLPDQAAALLQLKRSFNATIGDYSAAFRSWVAVAGADCCSWD

GVRCGGAGGRVTSLDLSHRDLQAASGLDDALFSLTSLEYLDLSSNDFGKSQMPATGFEKLTGLTHLDLSNTNFAG

LVPAGIGRLTRLSYLDLSTTFFVEELDDEYSITYYYSDTMAQLSESSLETLLANLTNLEELRLGMVVVKNMSSKG

TARWCDAMARSSPKLRVISMPYCSLSGPICHSLSALRSLSVIELQYNHLSGPVPEFLAALPNLSVLQLANNMFEG

VFPPIIFQHEKLTTINLTKNLGIFGNLPCFSGDSSLQSLSVSNTNFSGTIPSSISNLRSLKELALGASGFSGVLP

SSISQLKSLSLLEVSGLELAGSMPSWISNLTSLNVLKFFSCGLSGPIPASIGNLTKLTKLALYNCHFSGVIAPQI

LNLTHLQYLLLHSNNLVGTVELSSYSKMQNLSALNLSNNRLVVMDGENSSSVVCYPNIILLRLASCSISSFPNIL

RHLHEITFLDLSYNQIHGAIPRWAWKTLNLGFALFNLSHNKFTSIGSHPFLPVYIEFFDLSFNNIEGTIPIPKEG

SVTLDYSNNRFSSLPLNFSTYLSNTVLFKASNNSISGNIPPSICDGIKSLQLIDLSNNNLTGLIPSCLMEDANAL

QILDIGNNKISDSFPCWMSKLPQLLVLVLKSNRFSGQILDPSYTRGGNNCQFMKLQFADISSNNLSGTLPEEWFK

MLKSMIMVTSDNDMLMKEQHLYYRGKMQSYQFTAGISYKGSGLTISKTLRTLVLIDVSNNAFHGRIPRSIGELVL

LRALNMSHNALTGPIPVQFANLKQLELLDLSSNELYGEIL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	111	136	0.083
LRR [Pfam ls]	137	160	0.39
LRR [Pfam ls]	263	286	0.27
LRR [Pfam ls]	335	358	0.057
LRR [Pfam ls]	431	454	3.9
LRR [Pfam ls]	455	479	4.6
LRR [Pfam ls]	507	529	2.8
LRR [Pfam ls]	530	554	0.53
LRR [Pfam ls]	649	670	0.099
LRR [Pfam ls]	674	697	1.2
LRR [Pfam ls]	729	753	0.31
LRR [Pfam ls]	825	848	0.35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	85	110	0.57
LRR [sensitive, ls]	85	110	13
LRR [sensitive, ls]	111	136	0.0037
LRR [sensitive, ls]	111	136	0.083
LRR [sensitive, ls]	137	160	0.017
LRR [sensitive, ls]	137	160	0.39
LRR [sensitive, ls]	239	262	0.32
LRR [sensitive, ls]	239	262	7.3
LRR [sensitive, ls]	263	286	0.012
LRR [sensitive, ls]	263	286	0.27
LRR [sensitive, ls]	287	310	0.67
LRR [sensitive, ls]	287	310	15
LRR [sensitive, ls]	311	334	1.8
LRR [sensitive, ls]	311	334	41
LRR [sensitive, ls]	335	358	0.0026
LRR [sensitive, ls]	335	358	0.057
LRR [sensitive, ls]	359	382	0.89
LRR [sensitive, ls]	359	382	20
LRR [sensitive, ls]	383	406	0.6
LRR [sensitive, ls]	383	406	13
LRR [sensitive, ls]	407	430	0.29
LRR [sensitive, ls]	407	430	6.5
LRR [sensitive, ls]	431	454	0.17
LRR [sensitive, ls]	431	454	3.9
LRR [sensitive, ls]	455	479	0.2
LRR [sensitive, ls]	455	479	4.6
LRR [sensitive, ls]	480	500	0.52
LRR [sensitive, ls]	480	500	12
LRR [sensitive, ls]	507	529	0.12
LRR [sensitive, ls]	507	529	2.8
LRR [sensitive, ls]	530	554	0.024
LRR [sensitive, ls]	530	554	0.53
LRR [sensitive, ls]	556	576	3
LRR [sensitive, ls]	556	576	66
LRR [sensitive, ls]	579	601	1.9
LRR [sensitive, ls]	579	601	44
LRR [sensitive, ls]	624	648	0.91
LRR [sensitive, ls]	624	648	20
LRR [sensitive, ls]	649	670	0.0044
LRR [sensitive, ls]	649	670	0.099
LRR [sensitive, ls]	674	697	0.052
LRR [sensitive, ls]	674	697	1.2
LRR [sensitive, ls]	729	753	0.014
LRR [sensitive, ls]	729	753	0.31
LRR [sensitive, ls]	801	824	0.38
LRR [sensitive, ls]	801	824	8.5
LRR [sensitive, ls]	825	848	0.015
LRR [sensitive, ls]	825	848	0.35

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	8	713	4e-49
Cf-9 [L. pimpinellifolium]	31	713	7e-63
CLV2 [A. thaliana]	36	715	1e-47
FLS2 [A.thaliana]	45	864	4e-64
Cf-9 [L. pimpinellifolium]	91	423	3e-13
Xa21 [O. sativa]	105	652	3e-35
Cf-9 [L. pimpinellifolium]	106	547	7e-18
FLS2 [A.thaliana]	109	546	2e-30
CLV2 [A. thaliana]	233	840	9e-42
CLV2 [A. thaliana]	327	865	5e-49
Xa21 [O. sativa]	328	850	8e-42
Xa21 [O. sativa]	339	864	2e-39
CLV2 [A. thaliana]	370	864	1e-24
Xa21 [O. sativa]	431	863	7e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6538.m00123

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)