Report for 6603.m00128

 > 6603.m00128, length: 402, copies: 2 

MASAVLVFAGRSVATPAISFFVNKAFSYLNKYHKSEGLGDMKKRLKMNIPKIQSVIDVADPDYIKERSEDLDTWL

WQLRDAVEKAEDAIDELEYYELKEKQKDLKDSHLGSSFAKMNHKFFQSVKHVKMLGKTSDSPLKRLKKAMEDLDE

AAKGVENFLTVVDQITRPNLNIPQRHHSISRYRETGRMLTADRVFGRENEKERIVGWLTSTSSEENEVVMNNNPV

PIMSIVGHGGIGKTTLAQLIAKENRIKEHFKTVIWVSVSTNFNAETLISKIIQSVTLSKPSFDTYDALQEHLART

LETIKYLLILDDVWEDKEISEWEKLFASLRTGVYGRKILLTTRMQSVADLASAVMRCERERFPLCGLEETENLEL

FNHHVFTYPDPQKFEELQEAGEKIARN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	178	392	9.1e-39
NB-ARC [Pfam ls]	178	402	1.1e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	29	400	5e-31
RPM1 [A. thaliana]	179	401	2e-14
Xa1 [Oryza sativa]	185	400	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	77	98

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6603.m00128

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)