Report for 6603.m00133

 > 6603.m00133, length: 397, copies: 1 

MVSAWTIVPGIIVSLIVLVVTKLWDPIAQVYGYPFDAERRVQKLVDEFSKLQDQLGELGILDPKPSSAVLSGWLQ

RAAGCKDKVEEIKRRHESVKSVGVQGLLPRINVVRHLCAIGRDADLELEEVKDLIAKGEGHLKEAGAAPHPIPIP

IPLLPPPAAEFDNGQLAQSILDTAAAGTWGVGIQAMKPHLTSVLDFVREDGGGAPGVLGVWGMGGAGKTTLLKLA

RDPRVQTLDHIVLAEAGKCCDIAKLQDSIAQGTSLVLPPSLSVTNRATVLCNHLRNKKFLLLLDDLWNYIDLEAV

GIPLPLGRGNQRKVVLTSRSEAVCVSMARQGVTIRMGCLDQQDAFKLFEDKVGSATINADTRIPELARQLRLKLN

STNKNKFPREYYKYEGPKFTDW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	165	396	2.8e-07
NB-ARC [Pfam fs]	270	370	3.2e-19

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPS2 [A. thaliana]	190	367	1e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	36	58

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	2	24	in -> out

Report for 6603.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)